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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 212 47

  3. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 101 34

  4. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 98 91

  5. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 98 43

  6. task-execution-schemas task-execution-schemas Public

    96 32

Repositories

Showing 10 of 171 repositories
  • cat-vrs-python Public

    GA4GH Categorical Variation Representation Python Implementation

    ga4gh/cat-vrs-python's past year of commit activity
    Python 2 Apache-2.0 5 3 1 Updated Sep 25, 2026
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python's past year of commit activity
    Python 63 Apache-2.0 43 68 9 Updated Sep 25, 2026
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec's past year of commit activity
    Jupyter Notebook 28 Apache-2.0 7 120 (1 issue needs help) 2 Updated Sep 24, 2026
  • task-execution-schemas Public
    ga4gh/task-execution-schemas's past year of commit activity
    96 Apache-2.0 32 45 7 Updated Sep 24, 2026
  • gkm-starter-kit Public

    A single community-facing entry point that helps someone understand and adopt GKS in practice.

    ga4gh/gkm-starter-kit's past year of commit activity
    Python 2 CC0-1.0 1 2 1 Updated Sep 24, 2026
  • ga4gh-sdk Public

    Generic SDK and CLI for GA4GH API services

    ga4gh/ga4gh-sdk's past year of commit activity
    Rust 15 Apache-2.0 6 33 0 Updated Sep 24, 2026
  • ga4gh-reference-cloud-helm Public

    Helm chart for the GA4GH Reference Cloud

    ga4gh/ga4gh-reference-cloud-helm's past year of commit activity
    0 0 0 0 Updated Sep 23, 2026
  • ga4gh-agentic-harness-mcp Public Forked from mfiume/ga4gh-agentic-harness-mcp

    Universal MCP server for GA4GH services and the GA4GH Implementation Registry (DRS/TRS/WES + generic service-info), with pluggable auth and dual stdio/HTTP transports.

    ga4gh/ga4gh-agentic-harness-mcp's past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Sep 23, 2026
  • ga4gh-agentic-harness-profile Public Forked from mfiume/ga4gh-agentic-harness-profile

    GA4GH Agentic Harness Profile: protocol-neutral operations, schemas, bindings, and conformance materials

    ga4gh/ga4gh-agentic-harness-profile's past year of commit activity
    Python 0 Apache-2.0 1 0 1 Updated Sep 23, 2026
  • ga4gh-agentic-harness-python Public Forked from mfiume/ga4gh-agentic-harness-python

    Python reference implementation of the GA4GH Agentic Harness Profile

    ga4gh/ga4gh-agentic-harness-python's past year of commit activity
    Python 0 1 0 1 Updated Sep 23, 2026
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